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Studies in Health Technology and Informatics
Volume 126, 2007
From Genes to Personalized HealthCare: Grid Solutions for the Life Sciences
- Proceedings of HealthGrid 2007
Edited by Nicolas Jacq, Henning Müller, Ignacio Blanquer, Yannick Legré, Vincent Breton, Dominique Hausser, Vicente Hernández, Tony Solomonides, Martin Hofmann-Apitius
| 978-1-58603-738-3 (print) |
| 978-1-60750-242-5 (online) |
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I. State of the Art of the Grid Research and Use at Molecule Level
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Tandem Mass Spectrometry Protein Identification on a PC Grid
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3 - 12 |
| D. Zosso, M. Podvinec, M. Müller, R. Aebersold, M.C. Peitsch, T. Schwede
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Grid-based Analysis of Tandem Mass Spectrometry Data in Clinical Proteomics
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13 - 22 |
| Andreas Quandt, Patricia Hernandez, Peter Kunzst, Cesare Pautasso, Marc Tuloup, Celine Hernandez, Ron D. Appel
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BGBlast: A BLAST Grid Implementation with Database Self-Updating and Adaptive Replication
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23 - 30 |
| Gabriele A. Trombetti, Ivan Merelli, Alessandro Orro, Luciano Milanesi
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Advances in the biomedical applications of the EELA Project
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31 - 36 |
| Vicente Hernández, Ignacio Blanquer, Gabriel Aparicio, Raúl Isea, Juan Luis Chaves, Álvaro Hernández, Henry Ricardo Mora, Manuel Fernández, Alicia Acero, Esther Montes, Rafael MAYO
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Sleep Medicine as a Scenario for Medical Grid Application
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37 - 46 |
| Sebastian Canisius, Thomas Ploch, Karl Kesper, Matthew Smith, Bernd Freisleben, Thomas Penzel
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Grid Enabled High Throughput Virtual Screening Against Four Different Targets Implicated in Malaria
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47 - 54 |
| Jean Salzemann, Vinod Kasam, Nicolas Jacq, Astrid Maass, Horst Schwichtenberg, Vincent Breton
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Porting PHYLIP phylogenetic package on the Desktop GRID platform XtremWeb-CH
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55 - 64 |
| Nabil Abdennadher, Regis Boesch
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II. State of the Art of the Grid Research and Use at Cell Level
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Security-oriented Data Grids for Microarray Expression Profiles
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67 - 76 |
| Richard Sinnott, Christopher Bayliss, Jipu Jiang
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The Molecular Medicine Informatics Model (MMIM)
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77 - 86 |
| Marienne Hibbert, Peter Gibbs, Terence O'Brien, Peter Colman, Robert Merriel, Naomi Rafael, Michael Georgeff
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ImmunoGrid – The Virtual Human Immune System Project
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87 - 92 |
| Andrew Emerson, Elda Rossi
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Parameter Estimation for Cell Cycle Ordinary Differential Equation (ODE) Models using a Grid Approach
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93 - 102 |
| Roberta Alfieri, Ettore Mosca, Ivan Merelli, Luciano Milanesi
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III. State of the Art of the Grid Research and Use at Organ Level
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Monte Carlo Verification of IMRT treatment plans on Grid
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105 - 114 |
| Andrés Gómez, Carlos Fernández Sánchez, José Carlos Mouriño Gallego, Javier López Cacheiro, Francisco J. González Castaño, Daniel Rodríguez-Silva, Lorena Domínguez Carrera, David González Martínez, Javier Pena García, Faustino Gómez Rodríguez, Diego González Castaño, Miguel Pombar Cameán
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TRENCADIS – Secure Architecture to Share and Manage DICOM Objects in a Ontological Framework Based on OGSA
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115 - 124 |
| Ignacio Blanquer, Vicente Hernandez, Damià Segrelles, Erik Torres
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IV. State of the Art of the Grid Research and Use at Individual Level
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Grid-supported Medical Digital Library
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127 - 136 |
| Michal Kosiedowski, Cezary Mazurek, Maciej Stroinski, Jan Weglarz
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Care for Asthma via Mobile Phone (CAMP)
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137 - 143 |
| Shu-Hui Hung, Huan Chin Tseng, Wen Ho Tsai, Hsin Hung Lin, Jen Hsien Cheng, Yi-Ming Chang
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Data Integration in eHealth: A Domain/Disease Specific Roadmap
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144 - 153 |
| Jenny Ure, Rob Procter, Maryann Martone, David Porteous, Sharon Lloyd, Stephen Lawrie, Dominic Job, Richard Baldock, Alistair Philp, Dave Liewald, Frank Rakebrandt, Alan Blaikie, Clare McKay, Stuart Anderson, John Ainsworth, Jano van Hemert, Ignacio Blanquer, Richard Sinnott, Christian Barillot, Frank Bernard Gibaud, Alan Williams, Mark Hartswood, Paul Watson, Leslie Smith, Albert Burger, Jessie Kennedy, Horacio Gonzalez-Velez, Robert Stevens, Oscar Corcho, Robin Morton, Pamela Linksted, Mylene Deschenes, Mark McGilchrist, Paul Johnson, Alex Voss, Renate Gertz, Joanna Wardlaw
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Roadmap for a European Healthgrid
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154 - 163 |
| Vincent Breton, Ignacio Blanquer, Vicente Hernandez, Nicolas Jacq, Yannick Legre, Mark Olive, Tony Solomonides
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SHARE Roadmap 1: Towards a debate
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164 - 173 |
| Mark Olive, Hanene Rahmouni, Tony Solomonides, Vincent Breton, Yannick Legré, Ignacio Blanquer, Vicente Hernandez, Isabelle Andoulsi, Jean Herveg, Petra Wilson
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A Services Oriented System for Bioinformatics Applications on the Grid
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174 - 183 |
| Giovanni Aloisio, Massimo Cafaro, Italo Epicoco, Sandro Fiore, Maria Mirto
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Extending Workflow Management for Knowledge Discovery in Clinico-Genomic Data
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184 - 193 |
| Stefan Rüping, Stelios Sfakianakis, Manolis Tsiknakis
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V. State of the Art of the Grid Research and Use at Population Level
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IntegraEPI: A Grid-Based Epidemic Surveillance System
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197 - 206 |
| Fabricio A.B. da Silva, Henrique F. Gagliardi, Eduardo Gallo, Maria A. Madope, Virgílio C. Neto, Ivan T. Pisa, Domingos Alves
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Accelerating Medical Research using the Swift Workflow System
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207 - 216 |
| Tiberiu Stef-Praun, Benjamin Clifford, Ian Foster, Uri Hasson, Mihael Hategan, Steven L. Small, Michael Wilde, Yong Zhao
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Does HealthGrid Present Specific Risks With Regard To Data Protection?
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219 - 228 |
| Jean Herveg
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Secure and Pervasive Collaborative Platform for Medical Applications
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229 - 238 |
| Petr Holub, Eva Hladká, Michal Procházka, Miloš Liška
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Multi-centric Universal Pseudonymisation for Secondary Use of the EHR
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239 - 247 |
| Luigi Lo Iacono
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ICGrid: Enabling Intensive Care Medical Research on the EGEE Grid
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248 - 257 |
| Harald Gjermundrød, Marios D. Dikaiakos, Demetrios Zeinalipour-Yazti, George Panayi, Theodoros Kyprianou
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KnowARC: Enabling Grid networks for the biomedical research community
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261 - 268 |
| Henning Müller, Mikko Pitkanen, Xin Zhou, Adrien Depeursinge, Jimison Iavindrasana, Antoine Geissbuhler
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Globus MEDICUS – Federation of DICOM Medical Imaging Devices into Healthcare Grids
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269 - 278 |
| Stephan G. Erberich, Jonathan C. Silverstein, Ann Chervenak, Robert Schuler, Marvin D. Nelson, Carl Kesselman
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Alchemist Multimodal Workflows for Diabetic Retinopathy Research, Disease Prevention and Investigational Drug Discovery
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279 - 288 |
| Adina Riposan, Ian Taylor, David R. Owens, Omer Rana, Edward C. Conley
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Tissue MicroArray: a Distributed Grid Approach for Image Analysis
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291 - 298 |
| Federica Viti, Ivan Merelli, Antonella Galizia, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi
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A Grid Framework for Non-Linear Brain fMRI Analysis
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299 - 305 |
| Rodolfo Andrade, Ilídio Oliveira, José Maria Fernandes, João Paulo Silva Cunha
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From HealthGrid to SHARE: A Selective Review of Projects
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306 - 313 |
| Mark Olive, Hanene Rahmouni, Tony Solomonides
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An Agent Approach for Protein Function Analysis in a Grid Infrastructure
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314 - 321 |
| Alessandro Orro, Luciano Milanesi
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Shortcomings of Current Grid Middlewares Regarding Privacy in HealthGrids
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322 - 329 |
| Yassene Mohammed, Ulrich Sax, Fred Viezens, Otto Rienhoff
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Benefits of Provenance in Home Care
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330 - 337 |
| Ákos Hajnal, Tamás Kifor, Gianfranco Pedone, László Zsolt Varga
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